Wang Y, Sun MA (Eds). Transcriptome Data Analysis: Methods and Protocols. Methods in Molecular Biology Vol. 1751, Springer, Humana Press, 2018. ISSN: 1064-3745. DOI: 10.1007/978-1-4939-7710-9. Link


Shu XS, Zhao Y, Sun Y, Zhong L, Cheng Y, Zhang Y, Ning K, Tao Q, Wang Y, Ying Y. PBRM1 restricts the basal activity of innate immune system through repressing RIG-I-like receptor signaling and is a potential prognostic biomarker for colon cancer. Journal of Pathology. 2017 Sep 12; 244(1):36-48. Pubmed

Zhang S, Xu Y, Hui X, Yang F, Hu Y, Shao J, Liang H, Wang Y. Improvement in prediction of prostate cancer prognosis with somatic mutational signatures. Journal of Cancer. 2017 Aug 29. 8(16):3261-3267. Pubmed

Guo Z, Cheng X, Hui X, Shu X, White AP, Hu Y, Wang Y. Prediction of new bacterial type III secreted effectors with a recursive Hidden Markov Model profile-alignment strategy. Current Bioinformatics. 2017 Jul 24. Link

Zhang Q, Fan X, Wang Y, Sun M, Shao J, Guo D. BPP: a sequence-based algorithm for branch point prediction. Bioinformatics. 2017 Jun 19; 33(20):3166-3172. Pubmed

Hui X, Hu Y, Sun MA, Shu X, Han R, Ge Q, Wang Y. EBT: A Statistic Test Identifying Moderate Size of Significant Features with Balanced Power and Precision for Genome-wide Rate Comparisons. Bioinformatics. 2017 May 3; 33(17):2631-2641. Pubmed

Hu Y, Huang H, Cheng X, Shu X, White AP, Stavrinides J, Koster W, Zhu G, Zhao Z, Wang Y. A global survey of bacterial type III secretion systems and their effectors. Environ Microbiol. 2017 Apr 12; 19(10):3879-3895. Pubmed

Sun MA, Wang Y, Zhang Q, Xia Y, Ge W, Guo D. Prediction of reversible disulfide based on features from local structural signatures. BMC Genomics. 2017 Apr 4; 18(1):279. doi: 10.1186/s12864-017-3668-8. Pubmed

Wang J, Wang Y, Gao C, Jiang L, Guo D. PPero, a Computational Model for Plant PTS1 Type Peroxisomal Protein Prediction. PLoS ONE. 2017 Jan 3; 12(1):e0168912. doi: 10.1371/journal.pone.0168912. Pubmed


Han R, Huang G, Wang Y, Xu Y, Hu Y, Jiang W, Wang T, Xiao T, Zheng D. Increased gene expression noise in human cancers is correlated with low p53 and immune activities as well as late stage cancer. Oncotarget. 2016 Oct 4; doi: 10.18632/oncotarget.12457. Pubmed

Sun MA, Zhang Q, Wang Y, Ge W, Guo D. Prediction of redox-sensitive cysteines using sequential distance and other sequence-based features. BMC Bioinformatics. 2016 Aug 24;17(1):316. Pubmed

Shivak DJ, MacKenzie KD, Watson N, Pasternak A, Jones BD, Wang Y, DeVinney R, Wilson H, Surette MG, White AP. A modular, Tn7-based system for making bioluminescent or fluorescent Salmonella and E. coli strains. Appl Environ Microbiol. 2016 Jul 29;82(16):4931-43. Pubmed

Zhou L, Cheng L, He Y, Gu Y, Wang Y, Wang C. Association of gene polymorphisms of FV, FII, MTHFR, SERPINE1, CTLA4, IL10, and TNFalpha with pre-eclampsia in Chinese women. Inflamm Res. 2016 Sep;65(9):717-24. Pubmed

Hu Y, Huang H, Hui X, Cheng X, White AP, Zhao Z*, Wang Y*. Distribution and Evolution of Yersinia Leucine-Rich Repeat Proteins. Infect Immun. 2016 Jul 21;84(8):2243-54. Pubmed

2016-2018 All Rights Reserved
HCD Laboratory
Shenzhen University Health Science Center
Email: wangyj@szu.edu.cn